CDS

Accession Number TCMCG015C43571
gbkey CDS
Protein Id XP_027075503.1
Location complement(16252165..16254087)
Gene LOC113699368
GeneID 113699368
Organism Coffea arabica

Protein

Length 640aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027219702.1
Definition pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category S
Description PPR repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K17710        [VIEW IN KEGG]
ko:K17964        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000959        [VIEW IN EMBL-EBI]
GO:0000963        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004016        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009975        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016849        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080156        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0090615        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1900864        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGGCGATGCAGAGAAGAGTTTGTTCTGCCATAATTCTTTCCATTGCTCAGTCTCAGGAAGCAGCAGCAGCTTCATTAGGTACCACTGCTACTGCTAGGTGTACTACTCTTGCGTCATTTCTCTTTGCATTCCCAAACCCTAAAGCCCAATTAACTTTTTATTCTGCTGTTAGTGGCAAAGTTAAGAGTTATCCTGGAAAAGCTCTGAAGTTTCAACCGGGATTGAGGAATGATATTAATAATGTCGACAGTCTTGATGATGCTCTGAGCTTGTACCGGCAGATGGTCCGGATGAGGCCTCTGCCTTGTGTTATTCAGTTCAATCAATTGCTGGACCGTATTGTTAAGATGAAGAATCATTATGTATCTGCTATTTCCCTTTTTAGAGATATGTGTGTCAAGGGCATTCCTGCTTATGAGGCCACCCTTAATGTTGTGATTAATTGTTACTGCCTCTTGGGTCGAGTGGATTTGGGGTTTCCTGTGTTGGCTGCTTTCATGAAGCGTGGTCTTGTTGCTGATGTAGTCACTTTTAGTACTCTACTCAAAGGACTCTTTCGAGAACATAGGGTCCCCCAGGGACAAGAATTGTTTAAGAAGATAATATTCGAAAAACTTTGCAAGCCTGATGAAGTTATGTTTCTGATTGTGATAGATGGGCTCTGTAAGTTGGGGAACATTCAAATGGCCATTGAATTCCTGAGAGTCATGGAAAAAAGAAGATGTAAGCCGCATGTTAAAGTGTTCAATACCATCATTGACAGCTTTTGCAAAGATAAAATGGTTGACGAAGCTCTTGCCCTTTTGCAGGAGATGATTGAAAAGGGCATTCCCCCAAATGTTGTCACTTACAGTTGTTTGATTCAAGGTCTGTGCAACTTAAGCAGATGGGAGGATGTTGGCAAGATCTTTTCTGAGATGAAGGTTTATAAAATTATTCCAAATGTTATTACTTTCACTATAGTGGTGGATGCACTGTGTAAGGAAGGGCATATAGAAGATGCTGAAGAGGTATTCCAGATCATGATCCAGCAAGGTCAAAATCCCAATCTGGTCACATACTGTTCCTTAATGGATGGGTACTGTTTACAGAGGCGAATAGATGACGCAAGGAGAGTTTTCAATACCATGGTTGCTAGCGGCCTTACACCTGATCTCCATAGCTATGGTATTCTAATAAATGCCTATTCCAAGACCAAGAAAATGGAAGCAGCCATGAATCTCTTTCGAGAGATTCAGCATAAAGGTTTAAAACCTAATATTGTTGTTTATACCACTGTCTTGCAGGGGTTATTTAGTTCAGGAAGGTGTCTTAGTGCACGAGAAATTTTCAACGAGATGCAAGCTTCTGGCATGAAGCCTGATTTTCATACTTACTGTGTGGTGTTGGATGGATTATGCAAGACTGGACATGTCGACGAAGCATTGCAGTTATTCCATGCAATGGAAGCTGATGGAACAAATATTCACATTGGAATGTACAATATCATGCTTGATGGGTTGTGCAAAAGCAGGAGGCTCGATAGCGCTCGAGAACTTTTCAACAATCTCTCCCTTAAAGGATTGGATCCTGATGTTAGAATATACAACACCATGATTGCTGGTCTGCTTTCAGAAGGTCTGCTCATCGAAGCCAAAGAGCTTGTAAAAAAGATGGAGGGGAAGGGTTGCCTGCCAAATGATTTTACATACAATATTATACTGCAAGGACTCCTTAAGGGAGGTCATTATGATGATGCGATGGTCTATTATGAAGAAATGGTTCATAGAGGATTCTTGCTGGATGCATCTACTTTTTCCATTTTACTTGATTCATCTGCTGAAAATCAGAACAATTCTTCTCTATTAATGTTGATGCTGAAGATTGATCCTGATTGCAAGAAGCTTATGGATGGGGGACAAAGAGGACCTTCACATTAG
Protein:  
MMAMQRRVCSAIILSIAQSQEAAAASLGTTATARCTTLASFLFAFPNPKAQLTFYSAVSGKVKSYPGKALKFQPGLRNDINNVDSLDDALSLYRQMVRMRPLPCVIQFNQLLDRIVKMKNHYVSAISLFRDMCVKGIPAYEATLNVVINCYCLLGRVDLGFPVLAAFMKRGLVADVVTFSTLLKGLFREHRVPQGQELFKKIIFEKLCKPDEVMFLIVIDGLCKLGNIQMAIEFLRVMEKRRCKPHVKVFNTIIDSFCKDKMVDEALALLQEMIEKGIPPNVVTYSCLIQGLCNLSRWEDVGKIFSEMKVYKIIPNVITFTIVVDALCKEGHIEDAEEVFQIMIQQGQNPNLVTYCSLMDGYCLQRRIDDARRVFNTMVASGLTPDLHSYGILINAYSKTKKMEAAMNLFREIQHKGLKPNIVVYTTVLQGLFSSGRCLSAREIFNEMQASGMKPDFHTYCVVLDGLCKTGHVDEALQLFHAMEADGTNIHIGMYNIMLDGLCKSRRLDSARELFNNLSLKGLDPDVRIYNTMIAGLLSEGLLIEAKELVKKMEGKGCLPNDFTYNIILQGLLKGGHYDDAMVYYEEMVHRGFLLDASTFSILLDSSAENQNNSSLLMLMLKIDPDCKKLMDGGQRGPSH